Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC28.46■■■□□ 2.15
Pabpn1Q8CCS6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pabpn1Q8CCS6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pabpn1Q8CCS6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pabpn1Q8CCS6 Gm5540-201ENSMUST00000131852 1848 ntBASIC28.46■■■□□ 2.15
Pabpn1Q8CCS6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Pabpn1Q8CCS6 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Pabpn1Q8CCS6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Gm2213-201ENSMUST00000197485 688 ntBASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Pabpn1Q8CCS6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Gm4974-201ENSMUST00000209974 875 ntBASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Pabpn1Q8CCS6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
Pabpn1Q8CCS6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Pabpn1Q8CCS6 Gm11860-201ENSMUST00000122346 1010 ntBASIC28.43■■■□□ 2.14
Pabpn1Q8CCS6 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
Pabpn1Q8CCS6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Gm8000-201ENSMUST00000188378 592 ntBASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Vti1a-206ENSMUST00000225529 1244 ntBASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.42■■■□□ 2.14
Pabpn1Q8CCS6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Gm1401-201ENSMUST00000122048 772 ntBASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Gm2651-201ENSMUST00000203560 838 ntBASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Gm5186-201ENSMUST00000218781 920 ntBASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Pabpn1Q8CCS6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Mir770-201ENSMUST00000103252 94 ntBASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Pabpn1Q8CCS6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Pabpn1Q8CCS6 Gm10418-201ENSMUST00000100943 576 ntBASIC28.39■■■□□ 2.14
Pabpn1Q8CCS6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Pabpn1Q8CCS6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC28.39■■■□□ 2.14
Pabpn1Q8CCS6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC28.39■■■□□ 2.14
Pabpn1Q8CCS6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Pabpn1Q8CCS6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC28.39■■■□□ 2.13
Pabpn1Q8CCS6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Pabpn1Q8CCS6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Gm10052-201ENSMUST00000168019 960 ntBASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Gm7729-201ENSMUST00000050143 801 ntBASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Pabpn1Q8CCS6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Gm26039-201ENSMUST00000158152 144 ntBASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Gm43332-201ENSMUST00000202511 1044 ntBASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Gm44544-201ENSMUST00000207052 1844 ntBASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Pabpn1Q8CCS6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Gm12895-201ENSMUST00000122214 226 ntBASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Pabpn1Q8CCS6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms