Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.56■□□□□ 0.4
SynpoQ8CC35 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.56■□□□□ 0.4
SynpoQ8CC35 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Gm20760-201ENSMUST00000179197 648 ntBASIC17.56■□□□□ 0.4
SynpoQ8CC35 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SynpoQ8CC35 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SynpoQ8CC35 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.54■□□□□ 0.4
SynpoQ8CC35 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SynpoQ8CC35 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SynpoQ8CC35 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.53■□□□□ 0.4
SynpoQ8CC35 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.53■□□□□ 0.4
SynpoQ8CC35 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.53■□□□□ 0.4
SynpoQ8CC35 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SynpoQ8CC35 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SynpoQ8CC35 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SynpoQ8CC35 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SynpoQ8CC35 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SynpoQ8CC35 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.39
SynpoQ8CC35 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynpoQ8CC35 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SynpoQ8CC35 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynpoQ8CC35 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynpoQ8CC35 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SynpoQ8CC35 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms