Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Trim9Q8C7M3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Rarb-207ENSMUST00000225921 2756 ntBASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trim9Q8C7M3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Trim9Q8C7M3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim9Q8C7M3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Gm26524-201ENSMUST00000192339 390 ntBASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.07■□□□□ 0.8
Trim9Q8C7M3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim9Q8C7M3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Gm12933-201ENSMUST00000120203 872 ntBASIC20.05■□□□□ 0.8
Trim9Q8C7M3 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trim9Q8C7M3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trim9Q8C7M3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim9Q8C7M3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms