Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cfap54Q8C6S9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cfap54Q8C6S9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cfap54Q8C6S9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Gm28033-201ENSMUST00000184224 96 ntBASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cfap54Q8C6S9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap54Q8C6S9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap54Q8C6S9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cfap54Q8C6S9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Gm25925-201ENSMUST00000158314 306 ntBASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Zfp783-201ENSMUST00000095946 670 ntBASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Gm22697-201ENSMUST00000175194 63 ntBASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cfap54Q8C6S9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Gm17661-201ENSMUST00000170317 270 ntBASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.5■□□□□ 0.39
Cfap54Q8C6S9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cfap54Q8C6S9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cfap54Q8C6S9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms