Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col6a6Q8C6K9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col6a6Q8C6K9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col6a6Q8C6K9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col6a6Q8C6K9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Gm17971-201ENSMUST00000190239 806 ntBASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Col6a6Q8C6K9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col6a6Q8C6K9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col6a6Q8C6K9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms