Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Usp44Q8C2S0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Grk6-206ENSMUST00000224995 2971 ntBASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Gm29257-201ENSMUST00000186115 639 ntBASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Gm38285-201ENSMUST00000192928 922 ntBASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Zfp783-201ENSMUST00000095946 670 ntBASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Usp44Q8C2S0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Gm12441-201ENSMUST00000121806 588 ntBASIC21.36■■□□□ 1.01
Usp44Q8C2S0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Usp44Q8C2S0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Usp44Q8C2S0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Dio3-201ENSMUST00000097228 1449 ntBASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Usp44Q8C2S0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Usp44Q8C2S0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Usp44Q8C2S0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Usp44Q8C2S0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp44Q8C2S0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.33■■□□□ 1
Usp44Q8C2S0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Usp44Q8C2S0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Usp44Q8C2S0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp44Q8C2S0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp44Q8C2S0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp44Q8C2S0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Usp44Q8C2S0 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC21.32■■□□□ 1
Usp44Q8C2S0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.32■■□□□ 1
Usp44Q8C2S0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.32■■□□□ 1
Usp44Q8C2S0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.32■■□□□ 1
Usp44Q8C2S0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Usp44Q8C2S0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.32■■□□□ 1
Usp44Q8C2S0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Usp44Q8C2S0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp44Q8C2S0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp44Q8C2S0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp44Q8C2S0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Usp44Q8C2S0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.31■■□□□ 1
Usp44Q8C2S0 Gm11927-201ENSMUST00000118472 759 ntBASIC21.31■■□□□ 1
Usp44Q8C2S0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Usp44Q8C2S0 Flg-201ENSMUST00000050758 1488 ntBASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms