Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Mir7075-201ENSMUST00000184187 82 ntBASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tsen54Q8C2A2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tsen54Q8C2A2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tsen54Q8C2A2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tsen54Q8C2A2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.21■□□□□ 0.02
Tsen54Q8C2A2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tsen54Q8C2A2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.19■□□□□ 0.02
Tsen54Q8C2A2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tsen54Q8C2A2 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tsen54Q8C2A2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms