Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Smim4Q8C1Q6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Smim4Q8C1Q6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim4Q8C1Q6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim4Q8C1Q6 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smim4Q8C1Q6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Gm13146-201ENSMUST00000118508 780 ntBASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Reep4-203ENSMUST00000226563 1444 ntBASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim4Q8C1Q6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim4Q8C1Q6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms