Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Usp40Q8BWR4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Usp40Q8BWR4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC25.08■■□□□ 1.61
Usp40Q8BWR4 Gm7856-201ENSMUST00000117514 1493 ntBASIC25.08■■□□□ 1.6
Usp40Q8BWR4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
Usp40Q8BWR4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Usp40Q8BWR4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
Usp40Q8BWR4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
Usp40Q8BWR4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Gm38345-201ENSMUST00000192635 1748 ntBASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 AC166341.7-201ENSMUST00000221698 126 ntBASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Usp40Q8BWR4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp40Q8BWR4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp40Q8BWR4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp40Q8BWR4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp40Q8BWR4 AC153881.2-201ENSMUST00000214877 204 ntBASIC25.06■■□□□ 1.6
Usp40Q8BWR4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Usp40Q8BWR4 Notumos-201ENSMUST00000151998 2659 ntBASIC25.06■■□□□ 1.6
Usp40Q8BWR4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Mir2861-201ENSMUST00000175539 82 ntBASIC25.05■■□□□ 1.6
Usp40Q8BWR4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC25.05■■□□□ 1.6
Usp40Q8BWR4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Gm45906-201ENSMUST00000208911 1430 ntBASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Gm7712-202ENSMUST00000222331 1510 ntBASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Arhgef4-208ENSMUST00000211073 171 ntBASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Gm9987-201ENSMUST00000069768 567 ntBASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Usp40Q8BWR4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Gm9194-201ENSMUST00000220749 1447 ntBASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Gm12382-201ENSMUST00000122005 922 ntBASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Gm43799-201ENSMUST00000201845 579 ntBASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Usp40Q8BWR4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Gm5784-201ENSMUST00000179344 2478 ntBASIC25.02■■□□□ 1.6
Usp40Q8BWR4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Usp40Q8BWR4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC25■■□□□ 1.59
Usp40Q8BWR4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC25■■□□□ 1.59
Usp40Q8BWR4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Usp40Q8BWR4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp40Q8BWR4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Usp40Q8BWR4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Usp40Q8BWR4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp40Q8BWR4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Usp40Q8BWR4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC24.99■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms