Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Gm22240-201ENSMUST00000175225 82 ntBASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lig4Q8BTF7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lig4Q8BTF7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.27■□□□□ 0.67
Lig4Q8BTF7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lig4Q8BTF7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Iqck-206ENSMUST00000208658 2891 ntBASIC19.26■□□□□ 0.67
Lig4Q8BTF7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Gm11927-201ENSMUST00000118472 759 ntBASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Lig4Q8BTF7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lig4Q8BTF7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lig4Q8BTF7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Gm18666-201ENSMUST00000190039 958 ntBASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Zfp783-201ENSMUST00000095946 670 ntBASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lig4Q8BTF7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lig4Q8BTF7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lig4Q8BTF7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms