Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cc2d1bQ8BRN9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.12■□□□□ 0.81
Cc2d1bQ8BRN9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Grk6-206ENSMUST00000224995 2971 ntBASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Gm18284-201ENSMUST00000172604 624 ntBASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 AV356131-201ENSMUST00000206201 750 ntBASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cc2d1bQ8BRN9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.1■□□□□ 0.81
Cc2d1bQ8BRN9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cc2d1bQ8BRN9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cc2d1bQ8BRN9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cc2d1bQ8BRN9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cc2d1bQ8BRN9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cc2d1bQ8BRN9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms