Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rd3Q8BRE0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Mir5122-201ENSMUST00000175004 89 ntBASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Gm43183-201ENSMUST00000200632 547 ntBASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rd3Q8BRE0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Rd3Q8BRE0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Gm10138-203ENSMUST00000206952 366 ntBASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rd3Q8BRE0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Gm42545-201ENSMUST00000202755 922 ntBASIC19.29■□□□□ 0.68
Rd3Q8BRE0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rd3Q8BRE0 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rd3Q8BRE0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rd3Q8BRE0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rd3Q8BRE0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.27■□□□□ 0.68
Rd3Q8BRE0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rd3Q8BRE0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Rd3Q8BRE0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rd3Q8BRE0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rd3Q8BRE0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Gm15375-201ENSMUST00000119510 849 ntBASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rd3Q8BRE0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rd3Q8BRE0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms