Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.63■□□□□ 0.57
Suds3Q8BR65 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Gm6420-201ENSMUST00000193885 723 ntBASIC18.63■□□□□ 0.57
Suds3Q8BR65 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.63■□□□□ 0.57
Suds3Q8BR65 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.63■□□□□ 0.57
Suds3Q8BR65 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Suds3Q8BR65 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.62■□□□□ 0.57
Suds3Q8BR65 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Suds3Q8BR65 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.61■□□□□ 0.57
Suds3Q8BR65 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.61■□□□□ 0.57
Suds3Q8BR65 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Suds3Q8BR65 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gm13534-201ENSMUST00000121169 513 ntBASIC18.6■□□□□ 0.57
Suds3Q8BR65 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.6■□□□□ 0.57
Suds3Q8BR65 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.6■□□□□ 0.57
Suds3Q8BR65 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.59■□□□□ 0.57
Suds3Q8BR65 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Suds3Q8BR65 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Suds3Q8BR65 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Suds3Q8BR65 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Suds3Q8BR65 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
Suds3Q8BR65 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms