Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sfr1Q8BP27 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Gm22325-201ENSMUST00000158904 308 ntBASIC18.46■□□□□ 0.55
Sfr1Q8BP27 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sfr1Q8BP27 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sfr1Q8BP27 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sfr1Q8BP27 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sfr1Q8BP27 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.42■□□□□ 0.54
Sfr1Q8BP27 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sfr1Q8BP27 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Gm44549-201ENSMUST00000208351 577 ntBASIC18.41■□□□□ 0.54
Sfr1Q8BP27 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sfr1Q8BP27 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sfr1Q8BP27 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms