Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Prpf18Q8BM39 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Gm12251-201ENSMUST00000117893 792 ntBASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Gm8493-201ENSMUST00000196881 489 ntBASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prpf18Q8BM39 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prpf18Q8BM39 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Gm11421-201ENSMUST00000122124 294 ntBASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Prpf18Q8BM39 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf18Q8BM39 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf18Q8BM39 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prpf18Q8BM39 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Prpf18Q8BM39 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Smad6-203ENSMUST00000179458 273 ntBASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prpf18Q8BM39 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prpf18Q8BM39 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.23■□□□□ 0.35
Prpf18Q8BM39 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms