Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm38345-201ENSMUST00000192635 1748 ntBASIC24.1■■□□□ 1.45
Col16a1Q8BLX7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col16a1Q8BLX7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col16a1Q8BLX7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Col16a1Q8BLX7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
Col16a1Q8BLX7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
Col16a1Q8BLX7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Col16a1Q8BLX7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.44
Col16a1Q8BLX7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col16a1Q8BLX7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Gm9103-201ENSMUST00000119371 405 ntBASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 AC134329.2-201ENSMUST00000217897 428 ntBASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col16a1Q8BLX7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Gm14464-201ENSMUST00000119658 1254 ntBASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Gm27463-201ENSMUST00000183569 57 ntBASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Gm9194-201ENSMUST00000220749 1447 ntBASIC24.05■■□□□ 1.44
Col16a1Q8BLX7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Gm43353-201ENSMUST00000199224 1295 ntBASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Col16a1Q8BLX7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Gm45906-201ENSMUST00000208911 1430 ntBASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col16a1Q8BLX7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Gm12085-201ENSMUST00000119263 940 ntBASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Gm38027-201ENSMUST00000192315 235 ntBASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col16a1Q8BLX7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Rncr4-201ENSMUST00000194541 2234 ntBASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Col16a1Q8BLX7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms