Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdhr3Q8BL00 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cdhr3Q8BL00 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Gm13146-201ENSMUST00000118508 780 ntBASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Tgds-204ENSMUST00000228543 1594 ntBASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdhr3Q8BL00 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdhr3Q8BL00 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.85■□□□□ 0.13
Cdhr3Q8BL00 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 Gm9988-201ENSMUST00000069786 435 ntBASIC15.84■□□□□ 0.13
Cdhr3Q8BL00 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms