Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Npas4Q8BGD7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Npas4Q8BGD7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Npas4Q8BGD7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Npas4Q8BGD7 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Npas4Q8BGD7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Npas4Q8BGD7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Npas4Q8BGD7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Mir2861-201ENSMUST00000175539 82 ntBASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Npas4Q8BGD7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Npas4Q8BGD7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.18■□□□□ 0.66
Npas4Q8BGD7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Gm6659-201ENSMUST00000174752 547 ntBASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Npas4Q8BGD7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms