Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.93■□□□□ 0.46
Ubp1Q811S7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ubp1Q811S7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubp1Q811S7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubp1Q811S7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ubp1Q811S7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ubp1Q811S7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.92■□□□□ 0.46
Ubp1Q811S7 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.92■□□□□ 0.46
Ubp1Q811S7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Gm26524-201ENSMUST00000192339 390 ntBASIC17.91■□□□□ 0.46
Ubp1Q811S7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.91■□□□□ 0.46
Ubp1Q811S7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ubp1Q811S7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Rab3c-203ENSMUST00000224180 967 ntBASIC17.9■□□□□ 0.46
Ubp1Q811S7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.9■□□□□ 0.46
Ubp1Q811S7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ubp1Q811S7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ubp1Q811S7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ubp1Q811S7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Ubp1Q811S7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.88■□□□□ 0.45
Ubp1Q811S7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.88■□□□□ 0.45
Ubp1Q811S7 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.88■□□□□ 0.45
Ubp1Q811S7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.88■□□□□ 0.45
Ubp1Q811S7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Ubp1Q811S7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.87■□□□□ 0.45
Ubp1Q811S7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ubp1Q811S7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ubp1Q811S7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ubp1Q811S7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms