Protein–RNA interactions for Protein: Q80XC6

Nrde2, Protein NRDE2 homolog, mousemouse

Predictions only

Length 1,172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrde2Q80XC6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Nrde2Q80XC6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Nrde2Q80XC6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Nrde2Q80XC6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Flg-201ENSMUST00000050758 1488 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Gm9987-201ENSMUST00000069768 567 ntBASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Nrde2Q80XC6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nrde2Q80XC6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Nrde2Q80XC6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Nrde2Q80XC6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Nrde2Q80XC6 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Nrde2Q80XC6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.38■□□□□ 0.53
Nrde2Q80XC6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nrde2Q80XC6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms