Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Timm23-208ENSMUST00000226683 750 ntBASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp6nlQ80XC3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp6nlQ80XC3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.12■□□□□ 0.81
Usp6nlQ80XC3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp6nlQ80XC3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp6nlQ80XC3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp6nlQ80XC3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Usp6nlQ80XC3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Usp6nlQ80XC3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Gm12382-201ENSMUST00000122005 922 ntBASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Usp6nlQ80XC3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp6nlQ80XC3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp6nlQ80XC3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Usp6nlQ80XC3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp6nlQ80XC3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Usp6nlQ80XC3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Usp6nlQ80XC3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Gm7889-201ENSMUST00000185591 958 ntBASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp6nlQ80XC3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.05■□□□□ 0.8
Usp6nlQ80XC3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms