Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc116Q80X53 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc116Q80X53 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc116Q80X53 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc116Q80X53 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc116Q80X53 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc116Q80X53 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc116Q80X53 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Ccdc116Q80X53 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Ccdc116Q80X53 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.76■□□□□ 0.43
Ccdc116Q80X53 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Gm22325-201ENSMUST00000158904 308 ntBASIC17.76■□□□□ 0.43
Ccdc116Q80X53 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc116Q80X53 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc116Q80X53 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc116Q80X53 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms