Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Mir5122-201ENSMUST00000175004 89 ntBASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vrk1Q80X41 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vrk1Q80X41 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.31■□□□□ 0.36
Vrk1Q80X41 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Vrk1Q80X41 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.31■□□□□ 0.36
Vrk1Q80X41 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vrk1Q80X41 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Gm10138-203ENSMUST00000206952 366 ntBASIC17.3■□□□□ 0.36
Vrk1Q80X41 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vrk1Q80X41 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.29■□□□□ 0.36
Vrk1Q80X41 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.29■□□□□ 0.36
Vrk1Q80X41 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Vrk1Q80X41 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Gm11643-201ENSMUST00000119578 864 ntBASIC17.28■□□□□ 0.36
Vrk1Q80X41 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.28■□□□□ 0.36
Vrk1Q80X41 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms