Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Trim36Q80WG7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.56■□□□□ 0.4
Trim36Q80WG7 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trim36Q80WG7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.55■□□□□ 0.4
Trim36Q80WG7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trim36Q80WG7 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.55■□□□□ 0.4
Trim36Q80WG7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.54■□□□□ 0.4
Trim36Q80WG7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Trim36Q80WG7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trim36Q80WG7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.53■□□□□ 0.4
Trim36Q80WG7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim36Q80WG7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim36Q80WG7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim36Q80WG7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim36Q80WG7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Trim36Q80WG7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim36Q80WG7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trim36Q80WG7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.51■□□□□ 0.39
Trim36Q80WG7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.51■□□□□ 0.39
Trim36Q80WG7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim36Q80WG7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim36Q80WG7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms