Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prpf40bQ80W14 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prpf40bQ80W14 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prpf40bQ80W14 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prpf40bQ80W14 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prpf40bQ80W14 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prpf40bQ80W14 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prpf40bQ80W14 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf40bQ80W14 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Prpf40bQ80W14 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prpf40bQ80W14 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Prpf40bQ80W14 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms