Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim62Q80V85 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim62Q80V85 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim62Q80V85 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.86■□□□□ 0.61
Trim62Q80V85 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim62Q80V85 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim62Q80V85 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Gm12896-201ENSMUST00000118430 226 ntBASIC18.85■□□□□ 0.61
Trim62Q80V85 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim62Q80V85 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim62Q80V85 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Trim62Q80V85 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim62Q80V85 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim62Q80V85 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.84■□□□□ 0.61
Trim62Q80V85 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim62Q80V85 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim62Q80V85 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim62Q80V85 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim62Q80V85 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trim62Q80V85 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim62Q80V85 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim62Q80V85 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.83■□□□□ 0.61
Trim62Q80V85 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim62Q80V85 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim62Q80V85 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim62Q80V85 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim62Q80V85 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Trim62Q80V85 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim62Q80V85 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Trim62Q80V85 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim62Q80V85 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Trim62Q80V85 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim62Q80V85 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim62Q80V85 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim62Q80V85 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Gm38285-201ENSMUST00000192928 922 ntBASIC18.82■□□□□ 0.6
Trim62Q80V85 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Zfp783-201ENSMUST00000095946 670 ntBASIC18.82■□□□□ 0.6
Trim62Q80V85 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim62Q80V85 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim62Q80V85 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim62Q80V85 Gm20760-201ENSMUST00000179197 648 ntBASIC18.81■□□□□ 0.6
Trim62Q80V85 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Trim62Q80V85 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim62Q80V85 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim62Q80V85 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim62Q80V85 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.8■□□□□ 0.6
Trim62Q80V85 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Gm12527-201ENSMUST00000117967 564 ntBASIC18.8■□□□□ 0.6
Trim62Q80V85 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.8■□□□□ 0.6
Trim62Q80V85 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim62Q80V85 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms