Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Vps13bQ80TY5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Gm34391-201ENSMUST00000203706 907 ntBASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Vps13bQ80TY5 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Mir3081-201ENSMUST00000175305 84 ntBASIC10.93□□□□□ -0.66
Vps13bQ80TY5 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Vps13bQ80TY5 Gm25016-201ENSMUST00000158399 131 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm27463-201ENSMUST00000183569 57 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm29518-201ENSMUST00000190858 372 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm11950-201ENSMUST00000121615 838 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm27357-201ENSMUST00000183754 135 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC10.92□□□□□ -0.66
Vps13bQ80TY5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.92□□□□□ -0.66
Vps13bQ80TY5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Mir5130-201ENSMUST00000175160 84 ntBASIC10.91□□□□□ -0.66
Vps13bQ80TY5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vps13bQ80TY5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC10.9□□□□□ -0.66
Vps13bQ80TY5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13bQ80TY5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vps13bQ80TY5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms