Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf38bQ80SY5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Gm10517-202ENSMUST00000192970 758 ntBASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.97■□□□□ 0.63
Prpf38bQ80SY5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf38bQ80SY5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Mir5122-201ENSMUST00000175004 89 ntBASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf38bQ80SY5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf38bQ80SY5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Prpf38bQ80SY5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Prpf38bQ80SY5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Prpf38bQ80SY5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Prpf38bQ80SY5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms