Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pif1Q80SX8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pif1Q80SX8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.73■□□□□ 0.27
Pif1Q80SX8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pif1Q80SX8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Gm11643-201ENSMUST00000119578 864 ntBASIC16.72■□□□□ 0.27
Pif1Q80SX8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pif1Q80SX8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Mir5122-201ENSMUST00000175004 89 ntBASIC16.72■□□□□ 0.27
Pif1Q80SX8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.72■□□□□ 0.27
Pif1Q80SX8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Gm9987-201ENSMUST00000069768 567 ntBASIC16.72■□□□□ 0.27
Pif1Q80SX8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Pif1Q80SX8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pif1Q80SX8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.71■□□□□ 0.27
Pif1Q80SX8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.71■□□□□ 0.27
Pif1Q80SX8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pif1Q80SX8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.7■□□□□ 0.26
Pif1Q80SX8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.7■□□□□ 0.26
Pif1Q80SX8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pif1Q80SX8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Zfp783-201ENSMUST00000095946 670 ntBASIC16.69■□□□□ 0.26
Pif1Q80SX8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pif1Q80SX8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms