Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx58Q6Q899 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Gm43183-201ENSMUST00000200632 547 ntBASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx58Q6Q899 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx58Q6Q899 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Gm42545-201ENSMUST00000202755 922 ntBASIC22.52■■□□□ 1.2
Ddx58Q6Q899 AC175538.1-201ENSMUST00000225343 1269 ntBASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Iqck-206ENSMUST00000208658 2891 ntBASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx58Q6Q899 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx58Q6Q899 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx58Q6Q899 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx58Q6Q899 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Gm37292-201ENSMUST00000192062 758 ntBASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC22.48■■□□□ 1.19
Ddx58Q6Q899 Gm38308-201ENSMUST00000194934 1809 ntBASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Mir7071-201ENSMUST00000184847 69 ntBASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22.47■■□□□ 1.19
Ddx58Q6Q899 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx58Q6Q899 AC124581.1-201ENSMUST00000225416 1399 ntBASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.47■■□□□ 1.19
Ddx58Q6Q899 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx58Q6Q899 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms