Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Rif1Q6PR54 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.33■□□□□ 0.04
Rif1Q6PR54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.32■□□□□ 0.04
Rif1Q6PR54 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.32■□□□□ 0.04
Rif1Q6PR54 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rif1Q6PR54 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Gm15165-201ENSMUST00000118140 502 ntBASIC15.31■□□□□ 0.04
Rif1Q6PR54 Gm11927-201ENSMUST00000118472 759 ntBASIC15.31■□□□□ 0.04
Rif1Q6PR54 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rif1Q6PR54 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.31■□□□□ 0.04
Rif1Q6PR54 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rif1Q6PR54 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.3■□□□□ 0.04
Rif1Q6PR54 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.3■□□□□ 0.04
Rif1Q6PR54 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rif1Q6PR54 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.29■□□□□ 0.04
Rif1Q6PR54 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.29■□□□□ 0.04
Rif1Q6PR54 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rif1Q6PR54 Gm2213-201ENSMUST00000197485 688 ntBASIC15.28■□□□□ 0.04
Rif1Q6PR54 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.28■□□□□ 0.04
Rif1Q6PR54 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rif1Q6PR54 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Gm13884-201ENSMUST00000118103 829 ntBASIC15.27■□□□□ 0.04
Rif1Q6PR54 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rif1Q6PR54 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rif1Q6PR54 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.27■□□□□ 0.03
Rif1Q6PR54 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rif1Q6PR54 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 184.9 ms