Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smarcc2Q6PDG5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smarcc2Q6PDG5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
Smarcc2Q6PDG5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Smarcc2Q6PDG5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc2Q6PDG5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Gm12441-201ENSMUST00000121806 588 ntBASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Gm4968-201ENSMUST00000071458 858 ntBASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc2Q6PDG5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Rarb-207ENSMUST00000225921 2756 ntBASIC21.17■□□□□ 0.98
Smarcc2Q6PDG5 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Fst-202ENSMUST00000223640 2612 ntBASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Tgds-204ENSMUST00000228543 1594 ntBASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smarcc2Q6PDG5 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Gm22325-201ENSMUST00000158904 308 ntBASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc2Q6PDG5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms