Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Smarcd3Q6P9Z1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd3Q6P9Z1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd3Q6P9Z1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd3Q6P9Z1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Smarcd3Q6P9Z1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Fst-202ENSMUST00000223640 2612 ntBASIC16.66■□□□□ 0.26
Smarcd3Q6P9Z1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcd3Q6P9Z1 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms