Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgb4Q6P8W9 Gm6627-201ENSMUST00000218299 2386 ntBASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Gm21596-201ENSMUST00000178049 1316 ntBASIC19■□□□□ 0.63
Hmgb4Q6P8W9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hmgb4Q6P8W9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hmgb4Q6P8W9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hmgb4Q6P8W9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 BC021767-201ENSMUST00000126387 1716 ntBASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hmgb4Q6P8W9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Gm6576-201ENSMUST00000169678 883 ntBASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Gm18666-201ENSMUST00000190039 958 ntBASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hmgb4Q6P8W9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms