Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Abcf1Q6P542 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Gm7860-201ENSMUST00000121190 879 ntBASIC20.33■□□□□ 0.85
Abcf1Q6P542 Gm42569-201ENSMUST00000200539 472 ntBASIC20.33■□□□□ 0.85
Abcf1Q6P542 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Abcf1Q6P542 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Abcf1Q6P542 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Abcf1Q6P542 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Abcf1Q6P542 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.32■□□□□ 0.84
Abcf1Q6P542 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Abcf1Q6P542 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Abcf1Q6P542 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Abcf1Q6P542 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.3■□□□□ 0.84
Abcf1Q6P542 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.3■□□□□ 0.84
Abcf1Q6P542 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Abcf1Q6P542 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Reep4-203ENSMUST00000226563 1444 ntBASIC20.29■□□□□ 0.84
Abcf1Q6P542 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Gm13234-201ENSMUST00000120010 747 ntBASIC20.29■□□□□ 0.84
Abcf1Q6P542 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Abcf1Q6P542 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Abcf1Q6P542 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Abcf1Q6P542 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms