Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Gm5408-201ENSMUST00000197998 747 ntBASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Casc4Q6P2L7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Casc4Q6P2L7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Casc4Q6P2L7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Casc4Q6P2L7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Casc4Q6P2L7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.38■□□□□ 0.53
Casc4Q6P2L7 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Casc4Q6P2L7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Casc4Q6P2L7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Casc4Q6P2L7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Casc4Q6P2L7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms