Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf6Q6NVF9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Fst-202ENSMUST00000223640 2612 ntBASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.64■□□□□ 0.41
Cpsf6Q6NVF9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf6Q6NVF9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 AV356131-201ENSMUST00000206201 750 ntBASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf6Q6NVF9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf6Q6NVF9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.6■□□□□ 0.41
Cpsf6Q6NVF9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf6Q6NVF9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms