Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Birc2-201ENSMUST00000054878 378 ntBASIC18.67■□□□□ 0.58
Cep290Q6A078 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.67■□□□□ 0.58
Cep290Q6A078 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.67■□□□□ 0.58
Cep290Q6A078 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.67■□□□□ 0.58
Cep290Q6A078 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Gm27459-201ENSMUST00000184860 107 ntBASIC18.67■□□□□ 0.58
Cep290Q6A078 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.67■□□□□ 0.58
Cep290Q6A078 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cep290Q6A078 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cep290Q6A078 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.66■□□□□ 0.58
Cep290Q6A078 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cep290Q6A078 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Gm6623-201ENSMUST00000173570 544 ntBASIC18.66■□□□□ 0.58
Cep290Q6A078 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.66■□□□□ 0.58
Cep290Q6A078 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cep290Q6A078 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cep290Q6A078 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
Cep290Q6A078 Gm17808-201ENSMUST00000200859 894 ntBASIC18.65■□□□□ 0.58
Cep290Q6A078 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cep290Q6A078 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.65■□□□□ 0.58
Cep290Q6A078 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cep290Q6A078 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cep290Q6A078 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cep290Q6A078 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cep290Q6A078 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cep290Q6A078 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cep290Q6A078 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cep290Q6A078 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Cep290Q6A078 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Cep290Q6A078 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cep290Q6A078 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.64■□□□□ 0.57
Cep290Q6A078 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.64■□□□□ 0.57
Cep290Q6A078 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cep290Q6A078 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cep290Q6A078 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cep290Q6A078 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cep290Q6A078 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cep290Q6A078 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.63■□□□□ 0.57
Cep290Q6A078 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.63■□□□□ 0.57
Cep290Q6A078 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cep290Q6A078 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cep290Q6A078 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cep290Q6A078 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Cep290Q6A078 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cep290Q6A078 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cep290Q6A078 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cep290Q6A078 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
Cep290Q6A078 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.62■□□□□ 0.57
Cep290Q6A078 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.62■□□□□ 0.57
Cep290Q6A078 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cep290Q6A078 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cep290Q6A078 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Gm12085-201ENSMUST00000119263 940 ntBASIC18.61■□□□□ 0.57
Cep290Q6A078 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.61■□□□□ 0.57
Cep290Q6A078 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.61■□□□□ 0.57
Cep290Q6A078 Mir8098-201ENSMUST00000184011 137 ntBASIC18.61■□□□□ 0.57
Cep290Q6A078 Gm5864-201ENSMUST00000202263 970 ntBASIC18.61■□□□□ 0.57
Cep290Q6A078 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cep290Q6A078 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.6■□□□□ 0.57
Cep290Q6A078 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.6■□□□□ 0.57
Cep290Q6A078 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cep290Q6A078 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.6■□□□□ 0.57
Cep290Q6A078 Gm38285-201ENSMUST00000192928 922 ntBASIC18.6■□□□□ 0.57
Cep290Q6A078 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cep290Q6A078 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms