Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sdc3Q64519 Trmt13-210ENSMUST00000198454 880 ntBASIC17.44■□□□□ 0.38
Sdc3Q64519 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sdc3Q64519 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc3Q64519 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.44■□□□□ 0.38
Sdc3Q64519 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sdc3Q64519 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Gm20760-201ENSMUST00000179197 648 ntBASIC17.43■□□□□ 0.38
Sdc3Q64519 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc3Q64519 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.43■□□□□ 0.38
Sdc3Q64519 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sdc3Q64519 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.43■□□□□ 0.38
Sdc3Q64519 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdc3Q64519 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdc3Q64519 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Sdc3Q64519 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.42■□□□□ 0.38
Sdc3Q64519 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc3Q64519 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.41■□□□□ 0.38
Sdc3Q64519 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.41■□□□□ 0.38
Sdc3Q64519 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.41■□□□□ 0.38
Sdc3Q64519 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sdc3Q64519 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Sdc3Q64519 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sdc3Q64519 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sdc3Q64519 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.4■□□□□ 0.38
Sdc3Q64519 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sdc3Q64519 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sdc3Q64519 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc3Q64519 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.38
Sdc3Q64519 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc3Q64519 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sdc3Q64519 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.39■□□□□ 0.38
Sdc3Q64519 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Sdc3Q64519 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Gm13168-201ENSMUST00000121771 632 ntBASIC17.39■□□□□ 0.37
Sdc3Q64519 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.39■□□□□ 0.37
Sdc3Q64519 Gm2559-201ENSMUST00000201323 363 ntBASIC17.39■□□□□ 0.37
Sdc3Q64519 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sdc3Q64519 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.39■□□□□ 0.37
Sdc3Q64519 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sdc3Q64519 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms