Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.19■□□□□ 0.02
Commd3Q63829 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.19■□□□□ 0.02
Commd3Q63829 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Commd3Q63829 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Commd3Q63829 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Commd3Q63829 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Commd3Q63829 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.18■□□□□ 0.02
Commd3Q63829 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.18■□□□□ 0.02
Commd3Q63829 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.18■□□□□ 0.02
Commd3Q63829 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Commd3Q63829 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Commd3Q63829 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Commd3Q63829 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.18■□□□□ 0.02
Commd3Q63829 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Commd3Q63829 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.17■□□□□ 0.02
Commd3Q63829 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.17■□□□□ 0.02
Commd3Q63829 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Cap2-205ENSMUST00000225824 1634 ntBASIC15.17■□□□□ 0.02
Commd3Q63829 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Commd3Q63829 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Commd3Q63829 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Commd3Q63829 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Commd3Q63829 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.16■□□□□ 0.02
Commd3Q63829 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.16■□□□□ 0.02
Commd3Q63829 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Commd3Q63829 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.15■□□□□ 0.02
Commd3Q63829 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.15■□□□□ 0.02
Commd3Q63829 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Commd3Q63829 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Commd3Q63829 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Commd3Q63829 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.15■□□□□ 0.02
Commd3Q63829 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Commd3Q63829 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Commd3Q63829 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Commd3Q63829 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.14■□□□□ 0.01
Commd3Q63829 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.14■□□□□ 0.01
Commd3Q63829 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Commd3Q63829 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms