Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Six1Q62231 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Six1Q62231 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.71■□□□□ 0.59
Six1Q62231 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 Gm22325-201ENSMUST00000158904 308 ntBASIC18.71■□□□□ 0.59
Six1Q62231 Gm6420-201ENSMUST00000193885 723 ntBASIC18.71■□□□□ 0.59
Six1Q62231 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Six1Q62231 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.7■□□□□ 0.58
Six1Q62231 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.7■□□□□ 0.58
Six1Q62231 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Six1Q62231 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.7■□□□□ 0.58
Six1Q62231 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Nespas-201ENSMUST00000143738 1083 ntBASIC18.69■□□□□ 0.58
Six1Q62231 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Six1Q62231 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six1Q62231 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six1Q62231 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six1Q62231 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.68■□□□□ 0.58
Six1Q62231 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.68■□□□□ 0.58
Six1Q62231 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Six1Q62231 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Six1Q62231 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Six1Q62231 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.67■□□□□ 0.58
Six1Q62231 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.67■□□□□ 0.58
Six1Q62231 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six1Q62231 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.67■□□□□ 0.58
Six1Q62231 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six1Q62231 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.65■□□□□ 0.58
Six1Q62231 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
Six1Q62231 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.65■□□□□ 0.58
Six1Q62231 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Six1Q62231 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Six1Q62231 Gm10493-201ENSMUST00000097270 612 ntBASIC18.65■□□□□ 0.58
Six1Q62231 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Six1Q62231 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six1Q62231 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Six1Q62231 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.64■□□□□ 0.57
Six1Q62231 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Six1Q62231 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Six1Q62231 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms