Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smarcd1Q61466 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.96■□□□□ 0.63
Smarcd1Q61466 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.96■□□□□ 0.63
Smarcd1Q61466 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smarcd1Q61466 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.95■□□□□ 0.62
Smarcd1Q61466 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.95■□□□□ 0.62
Smarcd1Q61466 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.95■□□□□ 0.62
Smarcd1Q61466 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.95■□□□□ 0.62
Smarcd1Q61466 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.95■□□□□ 0.62
Smarcd1Q61466 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smarcd1Q61466 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.94■□□□□ 0.62
Smarcd1Q61466 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.94■□□□□ 0.62
Smarcd1Q61466 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcd1Q61466 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Mtag2-201ENSMUST00000058665 714 ntBASIC18.93■□□□□ 0.62
Smarcd1Q61466 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.93■□□□□ 0.62
Smarcd1Q61466 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Gm10812-201ENSMUST00000099864 546 ntBASIC18.92■□□□□ 0.62
Smarcd1Q61466 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcd1Q61466 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Smarcd1Q61466 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.91■□□□□ 0.62
Smarcd1Q61466 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.9■□□□□ 0.62
Smarcd1Q61466 Gm10138-203ENSMUST00000206952 366 ntBASIC18.9■□□□□ 0.62
Smarcd1Q61466 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcd1Q61466 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms