Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Ift88Q61371 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ift88Q61371 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.16■□□□□ 0.82
Ift88Q61371 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ift88Q61371 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.16■□□□□ 0.82
Ift88Q61371 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ift88Q61371 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.16■□□□□ 0.82
Ift88Q61371 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ift88Q61371 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ift88Q61371 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ift88Q61371 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ift88Q61371 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ift88Q61371 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.15■□□□□ 0.82
Ift88Q61371 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ift88Q61371 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ift88Q61371 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ift88Q61371 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.14■□□□□ 0.81
Ift88Q61371 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.14■□□□□ 0.81
Ift88Q61371 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.14■□□□□ 0.81
Ift88Q61371 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ift88Q61371 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.14■□□□□ 0.81
Ift88Q61371 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ift88Q61371 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 Reep4-203ENSMUST00000226563 1444 ntBASIC20.13■□□□□ 0.81
Ift88Q61371 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.13■□□□□ 0.81
Ift88Q61371 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ift88Q61371 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.13■□□□□ 0.81
Ift88Q61371 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ift88Q61371 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Gm13534-201ENSMUST00000121169 513 ntBASIC20.12■□□□□ 0.81
Ift88Q61371 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ift88Q61371 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ift88Q61371 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.11■□□□□ 0.81
Ift88Q61371 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ift88Q61371 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.11■□□□□ 0.81
Ift88Q61371 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 Tgds-204ENSMUST00000228543 1594 ntBASIC20.11■□□□□ 0.81
Ift88Q61371 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ift88Q61371 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.11■□□□□ 0.81
Ift88Q61371 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.1■□□□□ 0.81
Ift88Q61371 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ift88Q61371 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ift88Q61371 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Ift88Q61371 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ift88Q61371 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ift88Q61371 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Ift88Q61371 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ift88Q61371 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.09■□□□□ 0.81
Ift88Q61371 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ift88Q61371 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Ift88Q61371 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ift88Q61371 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ift88Q61371 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ift88Q61371 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ift88Q61371 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms