Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ClpbQ60649 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ClpbQ60649 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.43■□□□□ 0.38
ClpbQ60649 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.43■□□□□ 0.38
ClpbQ60649 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ClpbQ60649 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ClpbQ60649 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.42■□□□□ 0.38
ClpbQ60649 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.42■□□□□ 0.38
ClpbQ60649 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.42■□□□□ 0.38
ClpbQ60649 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
ClpbQ60649 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Gm12441-201ENSMUST00000121806 588 ntBASIC17.42■□□□□ 0.38
ClpbQ60649 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.42■□□□□ 0.38
ClpbQ60649 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ClpbQ60649 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.42■□□□□ 0.38
ClpbQ60649 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ClpbQ60649 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ClpbQ60649 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.41■□□□□ 0.38
ClpbQ60649 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.41■□□□□ 0.38
ClpbQ60649 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.41■□□□□ 0.38
ClpbQ60649 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ClpbQ60649 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.4■□□□□ 0.38
ClpbQ60649 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.4■□□□□ 0.38
ClpbQ60649 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.4■□□□□ 0.38
ClpbQ60649 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.4■□□□□ 0.38
ClpbQ60649 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.4■□□□□ 0.38
ClpbQ60649 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ClpbQ60649 Gm4968-201ENSMUST00000071458 858 ntBASIC17.4■□□□□ 0.38
ClpbQ60649 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ClpbQ60649 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ClpbQ60649 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ClpbQ60649 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ClpbQ60649 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
ClpbQ60649 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.39■□□□□ 0.37
ClpbQ60649 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ClpbQ60649 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.39■□□□□ 0.37
ClpbQ60649 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ClpbQ60649 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ClpbQ60649 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms