Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Xrcc1Q60596 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Xrcc1Q60596 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.39■□□□□ 0.38
Xrcc1Q60596 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.39■□□□□ 0.37
Xrcc1Q60596 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Xrcc1Q60596 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.39■□□□□ 0.37
Xrcc1Q60596 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.38■□□□□ 0.37
Xrcc1Q60596 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
Xrcc1Q60596 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.37■□□□□ 0.37
Xrcc1Q60596 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Xrcc1Q60596 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Gm2559-201ENSMUST00000201323 363 ntBASIC17.36■□□□□ 0.37
Xrcc1Q60596 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Xrcc1Q60596 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Gm2399-201ENSMUST00000104944 225 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Gm12896-201ENSMUST00000118430 226 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Dio3-201ENSMUST00000097228 1449 ntBASIC17.35■□□□□ 0.37
Xrcc1Q60596 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.35■□□□□ 0.37
Xrcc1Q60596 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Xrcc1Q60596 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Xrcc1Q60596 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms