Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ubr3Q5U430 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ubr3Q5U430 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ubr3Q5U430 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ubr3Q5U430 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Gm5587-201ENSMUST00000206270 674 ntBASIC22.31■■□□□ 1.16
Ubr3Q5U430 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ubr3Q5U430 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Umpk-ps-201ENSMUST00000211897 827 ntBASIC22.3■■□□□ 1.16
Ubr3Q5U430 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 AC130713.1-201ENSMUST00000228853 1096 ntBASIC22.3■■□□□ 1.16
Ubr3Q5U430 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ubr3Q5U430 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ubr3Q5U430 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC22.28■■□□□ 1.16
Ubr3Q5U430 Gm4974-201ENSMUST00000209974 875 ntBASIC22.28■■□□□ 1.16
Ubr3Q5U430 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Ubr3Q5U430 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.28■■□□□ 1.16
Ubr3Q5U430 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Ubr3Q5U430 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr3Q5U430 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ubr3Q5U430 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Gm15853-202ENSMUST00000195518 2041 ntBASIC22.27■■□□□ 1.16
Ubr3Q5U430 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Gm17807-201ENSMUST00000186869 298 ntBASIC22.27■■□□□ 1.16
Ubr3Q5U430 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ubr3Q5U430 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Gm9013-201ENSMUST00000132939 882 ntBASIC22.26■■□□□ 1.15
Ubr3Q5U430 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Gm7461-201ENSMUST00000058918 827 ntBASIC22.26■■□□□ 1.15
Ubr3Q5U430 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Ubr3Q5U430 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 AC108858.1-201ENSMUST00000228461 1498 ntBASIC22.25■■□□□ 1.15
Ubr3Q5U430 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC22.25■■□□□ 1.15
Ubr3Q5U430 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ubr3Q5U430 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Gm27704-201ENSMUST00000185094 107 ntBASIC22.24■■□□□ 1.15
Ubr3Q5U430 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubr3Q5U430 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.23■■□□□ 1.15
Ubr3Q5U430 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms