Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav7d-3Q5R1I1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav7d-3Q5R1I1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav7d-3Q5R1I1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav7d-3Q5R1I1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav7d-3Q5R1I1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms