Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav8d-1Q5R1H8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Gm12251-201ENSMUST00000117893 792 ntBASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Gm43173-201ENSMUST00000202246 593 ntBASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav8d-1Q5R1H8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Gm26833-201ENSMUST00000180899 440 ntBASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Serp2-204ENSMUST00000228055 705 ntBASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Trav8d-1Q5R1H8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav8d-1Q5R1H8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav8d-1Q5R1H8 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav8d-1Q5R1H8 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav8d-1Q5R1H8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms