Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm12922-201ENSMUST00000120626 809 ntBASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav15-1-dv6-1Q5R1D2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav15-1-dv6-1Q5R1D2 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms