Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC21.06■□□□□ 0.96
Rc3h1Q4VGL6 Mir6982-201ENSMUST00000184354 68 ntBASIC21.06■□□□□ 0.96
Rc3h1Q4VGL6 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.06■□□□□ 0.96
Rc3h1Q4VGL6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rc3h1Q4VGL6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rc3h1Q4VGL6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Gm6576-201ENSMUST00000169678 883 ntBASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rc3h1Q4VGL6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Gm10138-203ENSMUST00000206952 366 ntBASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rc3h1Q4VGL6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rc3h1Q4VGL6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Mir1199-201ENSMUST00000117015 119 ntBASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Gm715-201ENSMUST00000117865 831 ntBASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rc3h1Q4VGL6 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm15375-201ENSMUST00000119510 849 ntBASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm29241-201ENSMUST00000189260 1096 ntBASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm42545-201ENSMUST00000202755 922 ntBASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm9194-201ENSMUST00000220749 1447 ntBASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rc3h1Q4VGL6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.99■□□□□ 0.95
Rc3h1Q4VGL6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms